Table S5: Novel SNVs

sample assay chr loc refb gene exon rsnum LRS_F LRS_R type genotype
NA06995 capture assay 1 1 11224544 T NA NA NA 12.376 18.036 Het_ref/mut T/C
NA07037 capture assay 1 5 112202576 T APC_ex15 exon NA 30.144 32.751 Het_ref/mut T/C
NA07435 capture assay 1 7 55235415 G NA NA NA 5.723 4.172 Het_ref/mut G/A
NA07037 capture assay 2 1 6089234 C CHD5_ex39 roi5 NA 63.597 80.418 Het_mut/ref T/C
NA07037 capture assay 2 1 150590171 G FLG2_ex2 exon NA 21.122 37.99 Het_ref/mut G/T
NA07037 capture assay 2 1 150593602 T FLG2_ex2 exon NA 32.655 35.872 Het_ref/mut T/C
NA07037 capture assay 2 1 173591143 A NA NA NA 13.424 17.112 Het_mut/ref G/T
NA07037 capture assay 2 1 173641873 C NA NA NA 23.392 37.227 Het_ref/mut C/T
NA07037 capture assay 2 2 79990302 C CTNNA2_ex6 exon NA 17.117 11.426 Het_ref/mut C/G
NA07037 capture assay 2 2 148401421 T NA NA NA 10.279 11.133 Het_ref/mut T/C
NA07037 capture assay 2 3 180418786 A PIK3CA_ex9 exon NA 38.424 61.681 Het_ref/mut A/C
NA07037 capture assay 2 5 112202576 T APC_ex15 exon NA 8.667 18.817 Het_mut/ref C/T
NA07037 capture assay 2 6 41663238 T FOXP4_ex6 roi3 NA 15.914 11.071 Het_ref/mut T/A
NA07037 capture assay 2 6 69842778 C NA NA NA 10.1 4.009 Het_ref/mut C/T
NA07037 capture assay 2 6 80806560 G NA NA NA 11.309 15.849 Het_ref/mut G/A
NA07037 capture assay 2 7 98341785 C TRRAP_ex12 exon NA 21.428 21.612 Het_mut/ref T/C
NA07037 capture assay 2 7 151535387 C MLL3_ex24 exon NA 58.012 92.674 Het_mut/ref T/C
NA07037 capture assay 2 7 151535509 A NA NA NA 77.122 40.594 Het_mut/ref C/A
NA07037 capture assay 2 7 151548497 T MLL3_ex23 roi5 NA 29.753 55.757 Het_mut/ref G/T
NA07037 capture assay 2 7 151548643 A MLL3_ex23 exon NA 108.049 104.336 Het_mut/ref G/A
NA07037 capture assay 2 7 151550684 A MLL3_ex21 exon NA 20.411 32.078 Het_mut/ref G/A
NA07037 capture assay 2 7 151550984 A NA NA NA 18.013 7.424 Het_mut/ref C/A
NA07037 capture assay 2 7 151558253 C MLL3_ex17 exon NA 8.126 4.743 Het_ref/mut C/T
NA07037 capture assay 2 7 151576059 T MLL3_ex14 exon NA 15.851 12.443 Het_ref/mut T/C
NA07037 capture assay 2 7 151576457 T MLL3_ex14 exon NA 41.325 49.604 Het_mut/ref C/T
NA07037 capture assay 2 7 151576666 C MLL3_ex14 roi3 NA 27.357 10.156 Het_mut/ref T/C
NA07037 capture assay 2 7 151593287 T NA NA NA 31.873 46.02 Het_ref/mut T/C
NA07037 capture assay 2 7 151601708 C MLL3_ex7 roi5 NA 13.167 7.633 Het_ref/mut C/G
NA07037 capture assay 2 7 151602203 A NA NA NA 9.275 5.88 Het_mut/ref G/A
NA07037 capture assay 2 8 37809879 G GPR124_ex9 exon NA 33.912 25.929 Het_ref/mut G/A
NA07037 capture assay 2 9 32620312 C TAF1L_ex1 exon NA 13.988 5.178 Het_ref/mut C/G
NA07037 capture assay 2 9 32623451 T TAF1L_ex1 exon NA 7.422 6.897 Het_mut/ref C/T
NA07037 capture assay 2 9 93535106 G NA NA NA 8.597 14.862 Het_mut/ref A/G
NA07037 capture assay 2 10 42927764 G NA NA NA 6.446 7.033 Het_ref/mut G/T
NA07037 capture assay 2 10 55519618 A NA NA NA 19.096 17.446 Het_mut/ref C/A
NA07037 capture assay 2 10 89715339 C NA NA NA 25.147 13.542 Het_ref/mut C/G
NA07037 capture assay 2 11 64333723 G MEN1_ex1 exon NA 27.401 32.21 Het_ref/mut G/A
NA07037 capture assay 2 11 69172497 G NA NA NA 25.178 15.636 Het_mut/ref A/G
NA07037 capture assay 2 11 107603671 A ATM_ex1 roi3 NA 16.94 9.802 Het_ref/mut A/T
NA07037 capture assay 2 11 107656917 T ATM_ex23 roi5 NA 17.109 8.083 Het_ref/mut T/A
NA07037 capture assay 2 12 25269723 T NA NA NA 18.037 37.695 Het_ref/mut T/C
NA07037 capture assay 2 12 119921857 C HNF1A_ex9 roi3 NA 28.637 23.768 Het_mut/ref T/C
NA07037 capture assay 2 13 31828353 G NA NA NA 1.085 3.771 Hom A/A
NA07037 capture assay 2 13 31848571 C NA NA NA 1.482 -1.457 Hom T/T
NA07037 capture assay 2 14 102498837 C NA NA NA 4.523 4.13 Het_ref/mut C/G
NA07037 capture assay 2 15 20479978 G CYFIP1_ex4 roi3 NA 95.18 123.534 Het_mut/ref C/G
NA07037 capture assay 2 15 20480172 G NA NA NA 15.44 18.729 Het_mut/ref T/G
NA07037 capture assay 2 16 86317838 A KLHDC4_ex7 roi5 NA -2.2 -2.037 Hom C/C
NA07037 capture assay 2 17 10376059 C NA NA NA -3.841 -4.978 Hom T/T
NA07037 capture assay 2 17 11983876 T MAP2K4_ex10 roi5 NA 62.365 24.795 Het_ref/mut T/A
NA07037 capture assay 2 17 26578353 T NF1_ex19 roi5 NA 22.305 28.029 Het_ref/mut T/G
NA07037 capture assay 2 17 26578574 T NA NA NA 19.695 19.225 Het_mut/ref C/T
NA07037 capture assay 2 17 26580233 C NF1_ex21 exon NA 57.374 54.27 Het_ref/mut C/G
NA07037 capture assay 2 17 26580327 C NF1_ex21 exon NA 87.208 82.629 Het_ref/mut C/T
NA07037 capture assay 2 17 26580449 G NF1_ex21 exon NA 24.483 18.389 Het_ref/mut G/A
NA07037 capture assay 2 17 26580568 T NF1_ex21 exon NA 26.924 28.751 Het_ref/mut T/C
NA07037 capture assay 2 17 26580619 T NF1_ex21 roi3 NA 12.171 26.56 Het_ref/mut T/G
NA07037 capture assay 2 17 26580720 T NA NA NA 18.075 5.971 Het_mut/ref G/T
NA07037 capture assay 2 17 26586831 C NF1_ex28 exon NA 21.114 45.195 Het_ref/mut C/G
NA07037 capture assay 2 17 26586905 T NF1_ex28 exon NA 25.922 28.533 Het_ref/mut T/C
NA07037 capture assay 2 17 26586990 G NA NA NA 28.927 28.061 Het_ref/mut G/A
NA07037 capture assay 2 17 35134104 A NA NA NA 13.486 9.276 Het_ref/mut A/C
NA07037 capture assay 2 17 35135435 A ERBB2_ex23 roi5 NA 27.334 44.995 Het_ref/mut A/G
NA07037 capture assay 2 18 32446158 C NA NA NA 51.872 53.152 Het_ref/mut C/T
NA07037 capture assay 2 18 32574910 G NA NA NA 15.312 8.925 Het_mut/ref A/G
NA07037 capture assay 2 19 994103 G ABCA7_ex7 exon NA 203.45 164.561 Het_mut/ref A/G
NA07037 capture assay 2 19 997009 C NA NA NA 7.819 8.439 Het_ref/mut C/A
NA07037 capture assay 2 19 10326563 A NA NA NA 9.592 6.22 Het_ref/mut A/T
NA07037 capture assay 2 19 10960716 C NA NA NA 32.378 30.546 Het_mut/ref T/C
NA07037 capture assay 2 19 14940078 T SLC1A6_ex3 roi5 NA 17.551 21.544 Het_ref/mut T/C
NA07037 capture assay 2 19 14944916 C NA NA NA 10.727 9.019 Het_ref/mut C/A
NA07037 capture assay 2 22 28365021 G NA NA NA 22.373 19.279 Het_ref/mut G/A
NA07037 capture assay 2 23 70596592 A NA NA NA 13.976 13.625 Het_mut/ref T/A
NA07037 capture assay 2 23 85954778 T DACH2_ex9 roi5 NA 12.67 6.121 Het_mut/ref C/T
NA07037 capture assay 2 23 122378926 T GRIA3_ex11 roi5 NA 49.497 41.195 Het_ref/mut T/A
NA18507 capture assay 3 -replicate 1 6 80777210 T TTK_ex4 roi5 NA 5.196 5.759 Het_mut/ref A/T
NA18507 capture assay 3 -replicate 1 17 26578574 T NA NA NA 9.404 5.664 Het_mut/ref C/T
NA18507 capture assay 3 -replicate 1 1 6117547 G CHD5_ex19 roi3 NA 111.326 136.943 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 1 1 6129336 A CHD5_ex10 exon NA 5.572 6.775 Het_mut/ref G/A
NA18507 capture assay 3 -replicate 1 1 6135208 C CHD5_ex6 roi3 NA 45.4 36.129 Het_mut/ref G/C
NA18507 capture assay 3 -replicate 1 1 173589897 C NA NA NA 6.407 10.509 Het_mut/ref A/C
NA18507 capture assay 3 -replicate 1 2 179364924 T NA NA NA 13.327 15.621 Het_mut/ref C/T
NA18507 capture assay 3 -replicate 1 5 14333284 C NA NA NA 24.953 27.823 Het_mut/ref T/C
NA18507 capture assay 3 -replicate 1 5 14551835 C NA NA NA 55.434 63.118 Het_mut/ref T/C
NA18507 capture assay 3 -replicate 1 6 41653566 T NA NA NA 82.039 78.086 Het_mut/ref C/T
NA18507 capture assay 3 -replicate 1 6 70149221 G NA NA NA 9.244 14.276 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 1 7 98430030 C NA NA NA 13.996 13.82 Het_mut/ref T/C
NA18507 capture assay 3 -replicate 1 8 113432479 A NA NA NA 5.888 19.243 Het_mut/ref G/A
NA18507 capture assay 3 -replicate 1 11 64331734 G MEN1_ex3 roi3 NA 43.964 71.233 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 1 16 23619314 G ERN2_ex13 roi5 NA 19.428 30.647 Het_mut/ref T/G
NA18507 capture assay 3 -replicate 1 16 23619470 A ERN2_ex13 exon NA 24.091 18.945 Het_mut/ref G/A
NA18507 capture assay 3 -replicate 1 16 23621630 G NA NA NA 18.396 10.274 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 1 16 23632316 T NA NA NA 4.372 5.367 Het_mut/ref C/T
NA18507 capture assay 3 -replicate 1 16 86299653 G NA NA NA 27.948 30.405 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 1 18 19028563 G NA NA NA 109.035 90.082 Het_mut/ref C/G
NA18507 capture assay 3 -replicate 1 19 1009635 C ABCA7_ex37 exon NA 53.24 51.613 Het_mut/ref T/C
NA18507 capture assay 3 -replicate 1 19 10979796 G NA NA NA 19.662 17.342 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 1 5 24527677 G CDH10_ex10 exon NA 6.79 5.381 Het_ref/mut G/C
NA18507 capture assay 3 -replicate 1 6 70099730 G NA NA NA 6.668 5.138 Het_ref/mut G/C
NA18507 capture assay 3 -replicate 1 7 151580668 T MLL3_ex10 exon NA 44.569 34.121 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 1 8 37810809 T GPR124_ex11 roi3 NA 50.365 40.187 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 1 10 55260975 G NA NA NA 13.756 17.663 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 1 11 107708080 T NA NA NA 11.476 7.826 Het_ref/mut T/A
NA18507 capture assay 3 -replicate 1 12 77058296 T NA NA NA 7.775 5.63 Het_ref/mut T/A
NA18507 capture assay 3 -replicate 1 19 10999460 G SMARCA4_ex23 exon NA 7.227 4.126 Het_ref/mut G/C
NA18507 capture assay 3 -replicate 1 1 6095415 C NA NA NA 41.218 54.197 Het_ref/mut C/A
NA18507 capture assay 3 -replicate 1 1 6095427 C NA NA NA 39.596 46.879 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 1 1 11187351 T FRAP1_ex25 roi3 NA 63.326 56.335 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 1 1 64287811 G NA NA NA 10.773 17.551 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 1 1 150592079 C FLG2_ex2 exon NA 19.738 23.629 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 1 1 173573381 G TNR_ex17 exon NA 98.831 100.328 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 1 1 173642543 C NA NA NA 77.516 80.858 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 1 2 106789493 C NA NA NA 21.498 17.301 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 1 2 106826541 T ST6GAL2_ex1 exon NA 44.831 57.208 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 1 2 179350196 G TTN_ex26 exon NA 13.899 19.172 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 1 2 179350910 G TTN_ex24 exon NA 23.245 19.207 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 1 2 197989964 C NA NA NA 45.745 33.025 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 1 5 14390162 C NA NA NA 14.465 15.512 Het_ref/mut C/G
NA18507 capture assay 3 -replicate 1 5 14518755 G TRIO_ex37 roi3 NA 33.786 24.09 Het_ref/mut G/T
NA18507 capture assay 3 -replicate 1 5 14557537 A TRIO_ex55 exon NA 38.467 31.326 Het_ref/mut A/G
NA18507 capture assay 3 -replicate 1 7 81474786 G NA NA NA 6.609 8.614 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 1 7 81531704 T NA NA NA 13.109 11.023 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 1 7 98397141 A NA NA NA 36.876 34.872 Het_ref/mut A/G
NA18507 capture assay 3 -replicate 1 7 98429016 G NA NA NA 39.059 38.858 Het_ref/mut G/C
NA18507 capture assay 3 -replicate 1 7 151480588 C NA NA NA 8.998 11.977 Het_ref/mut C/A
NA18507 capture assay 3 -replicate 1 7 151482109 C MLL3_ex48 exon NA 13.325 12.117 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 1 8 37810025 G NA NA NA 17.571 7.219 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 1 8 113726783 A NA NA NA 43.654 42.81 Het_ref/mut A/G
NA18507 capture assay 3 -replicate 1 8 114180332 C CSMD3_ex6 exon NA 87.337 64.658 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 1 8 114518067 C CSMD3_ex1 roi5 NA 93.712 81.025 Het_ref/mut C/G
NA18507 capture assay 3 -replicate 1 11 85646396 A NA NA NA 16.895 13.316 Het_ref/mut A/C
NA18507 capture assay 3 -replicate 1 11 85654680 A NA NA NA 31.937 53.74 Het_ref/mut A/T
NA18507 capture assay 3 -replicate 1 12 77037548 T NAV3_ex15 exon NA 21.012 9.303 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 1 12 130064755 T GPR133_ex13 exon NA 73.704 85.025 Het_ref/mut T/G
NA18507 capture assay 3 -replicate 1 14 102502612 C NA NA NA 26.811 28.059 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 1 16 86317946 T KLHDC4_ex7 exon NA 8.832 7.498 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 1 17 10383173 T NA NA NA 12.452 24.596 Het_ref/mut T/A
NA18507 capture assay 3 -replicate 1 18 32446085 C FHOD3_ex9 roi3 NA 30.744 33.386 Het_ref/mut C/G
NA18507 capture assay 3 -replicate 1 18 32552166 G FHOD3_ex16 exon NA 12.176 13.805 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 1 18 41918445 G ATP5A1_ex11 roi5 NA 54.1 36.303 Het_ref/mut G/T
NA18507 capture assay 3 -replicate 1 18 41925819 T ATP5A1_ex3 roi3 NA 43.357 29.04 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 1 18 48996228 G NA NA NA 53.249 31.042 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 1 18 49102555 T DCC_ex14 roi3 NA 76.396 65.402 Het_ref/mut T/G
NA18507 capture assay 3 -replicate 1 19 993554 G NA NA NA 38.029 39.109 Het_ref/mut G/T
NA18507 capture assay 3 -replicate 1 19 10982030 T SMARCA4_ex14 roi5 NA 29.14 31.01 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 1 20 35448045 C NA NA NA 29.741 31.539 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 1 15 20498539 C CYFIP1_ex12 roi3 NA -24.542 -24.03 Hom T/T
NA18507 capture assay 3 -replicate 1 16 86317838 A KLHDC4_ex7 roi5 NA -3.327 -3.81 Hom C/C
NA18507 capture assay 3 -replicate 1 22 28399723 A NA NA NA -0.686 -3.272 Hom G/G
NA18507 capture assay 3 -replicate 2 6 70099730 G NA NA NA 5.72 4.639 Het_mut/ref C/G
NA18507 capture assay 3 -replicate 2 17 26578574 T NA NA NA 27.967 13.554 Het_mut/ref C/T
NA18507 capture assay 3 -replicate 2 1 6117547 G CHD5_ex19 roi3 NA 105.182 198.182 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 2 1 173642543 C NA NA NA 72.254 71.819 Het_mut/ref T/C
NA18507 capture assay 3 -replicate 2 5 14390162 C NA NA NA 22.75 18.767 Het_mut/ref G/C
NA18507 capture assay 3 -replicate 2 5 14551835 C NA NA NA 54.761 65.204 Het_mut/ref T/C
NA18507 capture assay 3 -replicate 2 7 81531704 T NA NA NA 5.76 7.855 Het_mut/ref C/T
NA18507 capture assay 3 -replicate 2 8 113432479 A NA NA NA 10.93 17.213 Het_mut/ref G/A
NA18507 capture assay 3 -replicate 2 8 113726783 A NA NA NA 30.32 28.713 Het_mut/ref G/A
NA18507 capture assay 3 -replicate 2 8 114518067 C CSMD3_ex1 roi5 NA 92.616 66.122 Het_mut/ref G/C
NA18507 capture assay 3 -replicate 2 11 64331734 G MEN1_ex3 roi3 NA 48.112 79.452 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 2 16 23621630 G NA NA NA 15.765 8.491 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 2 16 23632316 T NA NA NA 8.838 7.581 Het_mut/ref C/T
NA18507 capture assay 3 -replicate 2 16 86299653 G NA NA NA 34.154 31.517 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 2 18 19022946 T NA NA NA 4.812 6.447 Het_mut/ref G/T
NA18507 capture assay 3 -replicate 2 18 32346660 A NA NA NA 5.422 4.977 Het_mut/ref C/A
NA18507 capture assay 3 -replicate 2 18 32552166 G FHOD3_ex16 exon NA 15.478 18.364 Het_mut/ref A/G
NA18507 capture assay 3 -replicate 2 19 999829 C NA NA NA 4.287 4.918 Het_mut/ref A/C
NA18507 capture assay 3 -replicate 2 5 24527677 G CDH10_ex10 exon NA 6.933 6.3 Het_ref/mut G/C
NA18507 capture assay 3 -replicate 2 7 151580668 T MLL3_ex10 exon NA 50.424 36.96 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 8 37810809 T GPR124_ex11 roi3 NA 39.848 30.611 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 10 55260975 G NA NA NA 11.735 8.324 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 2 11 107708080 T NA NA NA 10.071 6.157 Het_ref/mut T/A
NA18507 capture assay 3 -replicate 2 1 6095415 C NA NA NA 41.846 46.052 Het_ref/mut C/A
NA18507 capture assay 3 -replicate 2 1 6095427 C NA NA NA 40.823 43.192 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 1 6135208 C CHD5_ex6 roi3 NA 28.643 25.121 Het_ref/mut C/G
NA18507 capture assay 3 -replicate 2 1 11187351 T FRAP1_ex25 roi3 NA 47.005 49.615 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 1 64287811 G NA NA NA 10.1 17.891 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 2 1 150592079 C FLG2_ex2 exon NA 14.073 22.994 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 1 150594695 T FLG2_ex2 exon NA 9.956 4.258 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 1 173573381 G TNR_ex17 exon NA 81.723 134.038 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 2 1 173589897 C NA NA NA 5.632 15.411 Het_ref/mut C/A
NA18507 capture assay 3 -replicate 2 2 47886386 T MSH6_ex7 roi3 NA 4.173 5.172 Het_ref/mut T/A
NA18507 capture assay 3 -replicate 2 2 106789493 C NA NA NA 22.563 18.55 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 2 106826541 T ST6GAL2_ex1 exon NA 28 51.315 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 2 179350196 G TTN_ex26 exon NA 7.649 11.026 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 2 2 179350910 G TTN_ex24 exon NA 22.589 20.564 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 2 2 179364924 T NA NA NA 12.622 17.747 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 2 197989964 C NA NA NA 73.785 47.292 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 3 73522812 T PDZRN3_ex6 roi5 NA 15.045 40.156 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 3 73740228 G NA NA NA 18.264 8.34 Het_ref/mut G/C
NA18507 capture assay 3 -replicate 2 5 14333284 C NA NA NA 24.536 43.337 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 5 14518755 G TRIO_ex37 roi3 NA 29.105 20.284 Het_ref/mut G/T
NA18507 capture assay 3 -replicate 2 5 14557537 A TRIO_ex55 exon NA 40.017 25.705 Het_ref/mut A/G
NA18507 capture assay 3 -replicate 2 6 41653566 T NA NA NA 35.434 44.209 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 6 70149221 G NA NA NA 6.492 17.901 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 2 7 81474786 G NA NA NA 5.079 12.655 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 2 7 98397141 A NA NA NA 35.617 34.372 Het_ref/mut A/G
NA18507 capture assay 3 -replicate 2 7 98429016 G NA NA NA 50.724 52.185 Het_ref/mut G/C
NA18507 capture assay 3 -replicate 2 7 98430030 C NA NA NA 8.167 11.747 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 7 151480588 C NA NA NA 7.909 15.185 Het_ref/mut C/A
NA18507 capture assay 3 -replicate 2 7 151482109 C MLL3_ex48 exon NA 12.247 11.628 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 7 151535217 G NA NA NA 4.654 9.909 Het_ref/mut G/T
NA18507 capture assay 3 -replicate 2 7 151535220 G NA NA NA 5.668 10.28 Het_ref/mut G/T
NA18507 capture assay 3 -replicate 2 7 151558253 C MLL3_ex17 exon NA 15.992 4.912 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 8 37817544 C GPR124_ex18 roi3 NA 7.03 8.494 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 8 114180332 C CSMD3_ex6 exon NA 57.432 43.24 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 10 89682754 A PTEN_ex5 exon NA 6.912 4.016 Het_ref/mut A/G
NA18507 capture assay 3 -replicate 2 11 85646396 A NA NA NA 13.846 15.905 Het_ref/mut A/C
NA18507 capture assay 3 -replicate 2 11 85654680 A NA NA NA 23.733 34.427 Het_ref/mut A/T
NA18507 capture assay 3 -replicate 2 11 107656917 T ATM_ex23 roi5 NA 11.272 4.15 Het_ref/mut T/A
NA18507 capture assay 3 -replicate 2 12 130064755 T GPR133_ex13 exon NA 55.013 74.887 Het_ref/mut T/G
NA18507 capture assay 3 -replicate 2 14 102502612 C NA NA NA 22.208 23.229 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 16 23619314 G ERN2_ex13 roi5 NA 15.506 39.84 Het_ref/mut G/T
NA18507 capture assay 3 -replicate 2 16 23619470 A ERN2_ex13 exon NA 23.143 14.401 Het_ref/mut A/G
NA18507 capture assay 3 -replicate 2 16 86317845 T KLHDC4_ex7 roi5 NA 4.621 11.548 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 16 86317946 T KLHDC4_ex7 exon NA 29.41 9.36 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 17 10383173 T NA NA NA 16.099 38.161 Het_ref/mut T/A
NA18507 capture assay 3 -replicate 2 17 26578365 G NF1_ex19 exon NA 10.585 12.494 Het_ref/mut G/C
NA18507 capture assay 3 -replicate 2 17 26578379 A NF1_ex19 exon NA 8.882 6.213 Het_ref/mut A/G
NA18507 capture assay 3 -replicate 2 17 26578465 C NF1_ex19 roi3 NA 8.761 6.266 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 17 26578482 A NF1_ex19 roi3 NA 8.864 13.658 Het_ref/mut A/T
NA18507 capture assay 3 -replicate 2 17 26578583 C NA NA NA 31.935 5.795 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 17 26580720 T NA NA NA 8.187 5.045 Het_ref/mut T/G
NA18507 capture assay 3 -replicate 2 17 35134104 A NA NA NA 9.545 4.3 Het_ref/mut A/C
NA18507 capture assay 3 -replicate 2 17 35134151 C NA NA NA 4.946 21.698 Het_ref/mut C/G
NA18507 capture assay 3 -replicate 2 18 19028563 G NA NA NA 106.196 86.276 Het_ref/mut G/C
NA18507 capture assay 3 -replicate 2 18 32446085 C FHOD3_ex9 roi3 NA 23.946 20.659 Het_ref/mut C/G
NA18507 capture assay 3 -replicate 2 18 41918445 G ATP5A1_ex11 roi5 NA 59.716 62.17 Het_ref/mut G/T
NA18507 capture assay 3 -replicate 2 18 41925819 T ATP5A1_ex3 roi3 NA 37.433 29.498 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 18 48996228 G NA NA NA 47.598 33.868 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 2 18 49102555 T DCC_ex14 roi3 NA 59.274 47.587 Het_ref/mut T/G
NA18507 capture assay 3 -replicate 2 19 993554 G NA NA NA 49.303 50.855 Het_ref/mut G/T
NA18507 capture assay 3 -replicate 2 19 1009635 C ABCA7_ex37 exon NA 48.911 62.262 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 19 10979796 G NA NA NA 14.68 13.298 Het_ref/mut G/A
NA18507 capture assay 3 -replicate 2 19 10982030 T SMARCA4_ex14 roi5 NA 23.442 27.82 Het_ref/mut T/C
NA18507 capture assay 3 -replicate 2 20 35448045 C NA NA NA 19.096 16.653 Het_ref/mut C/T
NA18507 capture assay 3 -replicate 2 6 80777210 T TTK_ex4 roi5 NA 3.57 1.217 Hom A/A
NA18507 capture assay 3 -replicate 2 1 6129177 C NA NA NA -10.674 -17.328 Hom T/T
NA18507 capture assay 3 -replicate 2 6 80777207 C TTK_ex4 roi5 NA 3.352 3.086 Hom T/T
NA18507 capture assay 3 -replicate 2 6 80777209 T TTK_ex4 roi5 NA 3.453 3.47 Hom G/G
NA18507 capture assay 3 -replicate 2 15 20498539 C CYFIP1_ex12 roi3 NA -26.703 -38.282 Hom T/T
NA18507 capture assay 3 -replicate 2 16 86317838 A KLHDC4_ex7 roi5 NA -3.901 -8.147 Hom C/C
NA18507 capture assay 3 -replicate 2 22 28399723 A NA NA NA -3.811 -1.368 Hom G/G


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